
Compare built-in degradation trajectories as faceted heatmaps
Source:R/reef-parameter_plots.R
plotDegScale.RdCreates a faceted heatmap comparing the three built-in degradation trajectories (rubble, algae, and recovery) side by side. Each panel shows how refuge density scaling factors change over time and across refuge size bins following a bleaching event.
Details
The colour scale shows scaling factors relative to pre-disturbance refuge density: values below 1 (red/pink) indicate a reduction, 1 (grey) indicates no change, and values above 1 (green/blue) indicate an increase.
See also
plotDegradationScale(), setDegradation(), reefDegrade(),
rubble_scale, algae_scale, recovery_scale
Other plotting functions:
plot2Productivity(),
plot2TotalBiomass(),
plotDegradationScale(),
plotProductivity(),
plotProductivityRelative(),
plotRefugeDensity(),
plotRefugeProfile(),
plotRelativeContribution(),
plotSpectraChange(),
plotTotalAbundance(),
plotTotalBiomass(),
plotTotalBiomassRelative(),
plotVulnerable()